HLA Reporting Implementation Guide
0.0.1 - Draft

This page is part of the HLA Reporting Implementation Guide (v0.0.1: Trial Use: 1) based on FHIR R4. This is the current published version. For a full list of available versions, see the Directory of published versions

HLA Gene Name Value Set

Summary

Defining URL:http://fhir.nmdp.org/ig/hla-reporting/ValueSet/hla-geneid-valueset
Version:0.0.1
Name:HLAGeneIdVS
Status:Active
Title:HLA Gene Name Value Set
Definition:

HLA HGNC GeneIds Valueset

Publisher:NMDP/Be The Match
Source Resource:XML / JSON / Turtle

Content Logical Definition

Logical Definition (CLD)

  • Include these codes as defined in http://www.genenames.org/geneId
    CodeDisplay
    HGNC:4931HLA-Amajor histocompatibility complex, class I, A
    HGNC:4932HLA-Bmajor histocompatibility complex, class I, B
    HGNC:4933HLA-Cmajor histocompatibility complex, class I, C
    HGNC:4934HLA-DMAmajor histocompatibility complex, class II, DM alpha
    HGNC:4935HLA-DMBmajor histocompatibility complex, class II, DM beta
    HGNC:4936HLA-DOAmajor histocompatibility complex, class II, DO alpha
    HGNC:4937HLA-DOBmajor histocompatibility complex, class II, DO beta
    HGNC:4938HLA-DPA1major histocompatibility complex, class II, DP alpha 1
    HGNC:4939HLA-DPA2major histocompatibility complex, class II, DP alpha 2 (pseudogene)
    HGNC:19393HLA-DPA3major histocompatibility complex, class II, DP alpha 3 (pseudogene)
    HGNC:4940HLA-DPB1major histocompatibility complex, class II, DP beta 1
    HGNC:4941HLA-DPB2major histocompatibility complex, class II, DP beta 2 (pseudogene)
    HGNC:4942HLA-DQA1major histocompatibility complex, class II, DQ alpha 1
    HGNC:4943HLA-DQA2major histocompatibility complex, class II, DQ alpha 2
    HGNC:4944HLA-DQB1major histocompatibility complex, class II, DQ beta 1
    HGNC:4945HLA-DQB2major histocompatibility complex, class II, DQ beta 2
    HGNC:4946HLA-DQB3major histocompatibility complex, class II, DQ beta 3
    HGNC:4947HLA-DRAmajor histocompatibility complex, class II, DR alpha
    HGNC:4948HLA-DRB1major histocompatibility complex, class II, DR beta 1
    HGNC:4950HLA-DRB2major histocompatibility complex, class II, DR beta 2 (pseudogene)
    HGNC:4951HLA-DRB3major histocompatibility complex, class II, DR beta 3
    HGNC:4952HLA-DRB4major histocompatibility complex, class II, DR beta 4
    HGNC:4953HLA-DRB5major histocompatibility complex, class II, DR beta 5
    HGNC:4954HLA-DRB6major histocompatibility complex, class II, DR beta 6 (pseudogene)
    HGNC:4955HLA-DRB7major histocompatibility complex, class II, DR beta 7 (pseudogene)
    HGNC:4956HLA-DRB8major histocompatibility complex, class II, DR beta 8 (pseudogene)
    HGNC:4957HLA-DRB9major histocompatibility complex, class II, DR beta 9 (pseudogene)
    HGNC:4962HLA-Emajor histocompatibility complex, class I, E
    HGNC:4963HLA-Fmajor histocompatibility complex, class I, F
    HGNC:4964HLA-Gmajor histocompatibility complex, class I, G
    HGNC:4965HLA-Hmajor histocompatibility complex, class I, H (pseudogene)
    HGNC:4967HLA-Jmajor histocompatibility complex, class I, J (pseudogene)
    HGNC:4969HLA-Kmajor histocompatibility complex, class I, K (pseudogene)
    HGNC:4970HLA-Lmajor histocompatibility complex, class I, L (pseudogene)
    HGNC:19406HLA-Nmajor histocompatibility complex, class I, N (pseudogene)
    HGNC:21196HLA-Pmajor histocompatibility complex, class I, P (pseudogene)
    HGNC:19395HLA-Smajor histocompatibility complex, class I, S (pseudogene)
    HGNC:23478HLA-Tmajor histocompatibility complex, class I, T (pseudogene)
    HGNC:23477HLA-Umajor histocompatibility complex, class I, U (pseudogene)
    HGNC:23482HLA-Vmajor histocompatibility complex, class I, V (pseudogene)
    HGNC:23425HLA-Wmajor histocompatibility complex, class I, W (pseudogene)
    HGNC:19385HLA-Xmajor histocompatibility complex, class I, X (pseudogene)
    HGNC:33913HLA-Ymajor histocompatibility complex, class I, Y (pseudogene)
    HGNC:19394HLA-Zmajor histocompatibility complex, class I, Z (pseudogene)

 

Expansion

This value set contains 44 concepts

Expansion based on HLA HGNC GeneID CodeSystem v0.0.1 (CodeSystem)

All codes from system http://www.genenames.org/geneId

CodeDisplayDefinition
HGNC:4931HLA-Amajor histocompatibility complex, class I, A
HGNC:4932HLA-Bmajor histocompatibility complex, class I, B
HGNC:4933HLA-Cmajor histocompatibility complex, class I, C
HGNC:4934HLA-DMAmajor histocompatibility complex, class II, DM alpha
HGNC:4935HLA-DMBmajor histocompatibility complex, class II, DM beta
HGNC:4936HLA-DOAmajor histocompatibility complex, class II, DO alpha
HGNC:4937HLA-DOBmajor histocompatibility complex, class II, DO beta
HGNC:4938HLA-DPA1major histocompatibility complex, class II, DP alpha 1
HGNC:4939HLA-DPA2major histocompatibility complex, class II, DP alpha 2 (pseudogene)
HGNC:19393HLA-DPA3major histocompatibility complex, class II, DP alpha 3 (pseudogene)
HGNC:4940HLA-DPB1major histocompatibility complex, class II, DP beta 1
HGNC:4941HLA-DPB2major histocompatibility complex, class II, DP beta 2 (pseudogene)
HGNC:4942HLA-DQA1major histocompatibility complex, class II, DQ alpha 1
HGNC:4943HLA-DQA2major histocompatibility complex, class II, DQ alpha 2
HGNC:4944HLA-DQB1major histocompatibility complex, class II, DQ beta 1
HGNC:4945HLA-DQB2major histocompatibility complex, class II, DQ beta 2
HGNC:4946HLA-DQB3major histocompatibility complex, class II, DQ beta 3
HGNC:4947HLA-DRAmajor histocompatibility complex, class II, DR alpha
HGNC:4948HLA-DRB1major histocompatibility complex, class II, DR beta 1
HGNC:4950HLA-DRB2major histocompatibility complex, class II, DR beta 2 (pseudogene)
HGNC:4951HLA-DRB3major histocompatibility complex, class II, DR beta 3
HGNC:4952HLA-DRB4major histocompatibility complex, class II, DR beta 4
HGNC:4953HLA-DRB5major histocompatibility complex, class II, DR beta 5
HGNC:4954HLA-DRB6major histocompatibility complex, class II, DR beta 6 (pseudogene)
HGNC:4955HLA-DRB7major histocompatibility complex, class II, DR beta 7 (pseudogene)
HGNC:4956HLA-DRB8major histocompatibility complex, class II, DR beta 8 (pseudogene)
HGNC:4957HLA-DRB9major histocompatibility complex, class II, DR beta 9 (pseudogene)
HGNC:4962HLA-Emajor histocompatibility complex, class I, E
HGNC:4963HLA-Fmajor histocompatibility complex, class I, F
HGNC:4964HLA-Gmajor histocompatibility complex, class I, G
HGNC:4965HLA-Hmajor histocompatibility complex, class I, H (pseudogene)
HGNC:4967HLA-Jmajor histocompatibility complex, class I, J (pseudogene)
HGNC:4969HLA-Kmajor histocompatibility complex, class I, K (pseudogene)
HGNC:4970HLA-Lmajor histocompatibility complex, class I, L (pseudogene)
HGNC:19406HLA-Nmajor histocompatibility complex, class I, N (pseudogene)
HGNC:21196HLA-Pmajor histocompatibility complex, class I, P (pseudogene)
HGNC:19395HLA-Smajor histocompatibility complex, class I, S (pseudogene)
HGNC:23478HLA-Tmajor histocompatibility complex, class I, T (pseudogene)
HGNC:23477HLA-Umajor histocompatibility complex, class I, U (pseudogene)
HGNC:23482HLA-Vmajor histocompatibility complex, class I, V (pseudogene)
HGNC:23425HLA-Wmajor histocompatibility complex, class I, W (pseudogene)
HGNC:19385HLA-Xmajor histocompatibility complex, class I, X (pseudogene)
HGNC:33913HLA-Ymajor histocompatibility complex, class I, Y (pseudogene)
HGNC:19394HLA-Zmajor histocompatibility complex, class I, Z (pseudogene)

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
Source The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code